SVN: ------- v. ( ) $Id$
read_special_init_pars parameters read...
read_special_init_pars parameters parsed...
SVN: ------- v. ( ) no cvsid is given i
read_special_run_pars parameters read...
WARNING: initialize_special: parameter "dataset" overwrites "dataset_type"!
read_special_run_pars parameters parsed...
SVN: run.in,v v. 1.1 (2021/04/01 11:33:46) joern
initialize_mpicomm: enabled MPI
SVN: ------- v. ( ) $Id$
SVN: ------- v. ( ) $Id$
SVN: ------- v. ( ) $Id$
SVN: ------- v. ( ) $Id$
SVN: ------- v. ( ) $Id$
SVN: ------- v. ( ) $Id$
SVN: ------- v. ( ) $Id$
SVN: ------- v. ( ) $Id$
SVN: ------- v. ( ) $Id$
SVN: ------- v. ( ) $Id$
SVN: ------- v. ( ) $Id$
SVN: ------- v. ( ) $Id$
SVN: ------- v. ( ) $Id$
SVN: ------- v. ( ) $Id$
SVN: ------- v. ( ) $Id$
SVN: ------- v. ( ) $Id$
SVN: ------- v. ( ) $Id$
SVN: ------- v. ( ) $Id$
SVN: ------- v. ( ) $Id$
SVN: ------- v. ( ) $Id$
SVN: ------- v. ( ) $Id$
SVN: ------- v. ( ) $Id$
SVN: ------- v. ( ) $Id$
SVN: ------- v. ( ) $Id$
SVN: ------- v. ( ) $Id$
SVN: ------- v. ( ) $Id$
SVN: ------- v. ( ) $Id$
register_special: loading data as double precision
register_special: setting parallel HDF5 IO for data file reading
register_special: opening datafile data/emftensors.h5 and loading relevant fields into memory...
SVN: ------- v. ( ) $Id$
SVN: ------- v. ( ) $Id$
The verbose level is ip= 14 (ldebug= F )
This is a 2-D run
nxgrid, nygrid, nzgrid= 40 64 1
Lx, Ly, Lz= 0.30000000000000004 2.6179910000000000 1.5708000000000000
Vbox= 2.6582608153155687
rsnap: read snapshot var.dat in 6.0796737670898438E-004 seconds
setup_slices: slice_position = p
setup_slices: ix_loc,iy_loc,iz_loc, (video files) = 4 4 4
units_general: unit_velocity= 1.0000000000000000
units_general: unit_density= 1.0000000000000000
units_general: unit_length= 1.0000000000000000
units_general: unit_magnetic= 3.5449077018110318
units_eos: unit_temperature= 4.8108883747190188E-009
units_eos: cp, lnTT0, cs0, pp0, Rgas= 1.0000000000000000 0.40546510810816422 1.0000000000000000 0.59999999999999998 0.40000000000000008
alpha_fine = 7.2973525643000000E-003
sigma_Thomson_cgs = 6.6524587321600003E-025
select_eos_variable: Using lnrho and ss
resistivity: constant eta
WARNING: initialize_special: x extent 180 in dataset "grid" different from nxgrid!
WARNING: initialize_special: y extent 256 in dataset "grid" different from nygrid!
At line 2044 of file special/meanfield_e_tensor.f90
Fortran runtime warning: An array temporary was created for argument 'dims' of procedure 'h5screate_simple_f'
At line 2044 of file special/meanfield_e_tensor.f90
Fortran runtime warning: An array temporary was created for argument 'dims' of procedure 'h5screate_simple_f'
Using dataset /emftensor/alpha/mean.
At line 2044 of file special/meanfield_e_tensor.f90
Fortran runtime warning: An array temporary was created for argument 'dims' of procedure 'h5screate_simple_f'
At line 2044 of file special/meanfield_e_tensor.f90
Fortran runtime warning: An array temporary was created for argument 'dims' of procedure 'h5screate_simple_f'
Using dataset /emftensor/beta/mean.
Using dataset /emftensor/gamma/mean.
Using dataset /emftensor/delta/mean.
Using dataset /emftensor/kappa/mean.
Using dataset /emftensor/utensor/mean.
Using dataset /emftensor/acoef/mean.
Using dataset /emftensor/bcoef/mean.
Alpha scale: 1.5000000000000000
Alpha components used:
| T T T |
| T T T |
| T T T |
Beta scale: 1.0000000000000000
Beta components used:
| T T T |
| T T T |
| T T T |
Gamma scale: 1.0000000000000000
Gamma components used:
| T T T |
Delta scale: 1.0000000000000000
Delta components used:
| T T T |
Kappa scale: 1.0000000000000000
Kappa components used:
|
|| T T T ||
|| T T T ||
|| T T T ||
|
|| T T T ||
|| T T T ||
|| T T T ||
|
|| T T T ||
|| T T T ||
|| T T T ||
|
U-mean scale: 1.0000000000000000
U-mean components used:
| T T T |
acoef scale: 1.0000000000000000
acoef components used:
| T T T |
| T T T |
| T T T |
bcoef scale: 1.0000000000000000
bcoef components used:
|
|| T T T ||
|| T T T ||
|| T T T ||
|
|| T T T ||
|| T T T ||
|| T T T ||
|
|| T T T ||
|| T T T ||
|| T T T ||
sh: 1: Syntax error: Bad fd number
pencil_consistency_check: checking pencil case
At line 2251 of file special/meanfield_e_tensor.f90
Fortran runtime warning: An array temporary was created for argument 'start' of procedure 'h5sselect_hyperslab_f'
At line 2252 of file special/meanfield_e_tensor.f90
Fortran runtime warning: An array temporary was created for argument 'count' of procedure 'h5sselect_hyperslab_f'
At line 2260 of file special/meanfield_e_tensor.f90
Fortran runtime warning: An array temporary was created for argument 'start' of procedure 'h5sselect_hyperslab_f'
At line 2261 of file special/meanfield_e_tensor.f90
Fortran runtime warning: An array temporary was created for argument 'count' of procedure 'h5sselect_hyperslab_f'
At line 2251 of file special/meanfield_e_tensor.f90
Fortran runtime warning: An array temporary was created for argument 'start' of procedure 'h5sselect_hyperslab_f'
At line 2252 of file special/meanfield_e_tensor.f90
Fortran runtime warning: An array temporary was created for argument 'count' of procedure 'h5sselect_hyperslab_f'
At line 2260 of file special/meanfield_e_tensor.f90
Fortran runtime warning: An array temporary was created for argument 'start' of procedure 'h5sselect_hyperslab_f'
At line 2261 of file special/meanfield_e_tensor.f90
Fortran runtime warning: An array temporary was created for argument 'count' of procedure 'h5sselect_hyperslab_f'
At line 2275 of file special/meanfield_e_tensor.f90
Fortran runtime warning: An array temporary was created for argument 'dims' of procedure 'h5dread_double_6'
At line 2275 of file special/meanfield_e_tensor.f90
Fortran runtime warning: An array temporary was created for argument 'dims' of procedure 'h5dread_double_6'
At line 2251 of file special/meanfield_e_tensor.f90
Fortran runtime warning: An array temporary was created for argument 'start' of procedure 'h5sselect_hyperslab_f'
At line 2252 of file special/meanfield_e_tensor.f90
Fortran runtime warning: An array temporary was created for argument 'count' of procedure 'h5sselect_hyperslab_f'
At line 2260 of file special/meanfield_e_tensor.f90
Fortran runtime warning: An array temporary was created for argument 'start' of procedure 'h5sselect_hyperslab_f'
At line 2261 of file special/meanfield_e_tensor.f90
Fortran runtime warning: An array temporary was created for argument 'count' of procedure 'h5sselect_hyperslab_f'
At line 2275 of file special/meanfield_e_tensor.f90
Fortran runtime warning: An array temporary was created for argument 'dims' of procedure 'h5dread_double_6'
At line 2251 of file special/meanfield_e_tensor.f90
Fortran runtime warning: An array temporary was created for argument 'start' of procedure 'h5sselect_hyperslab_f'
At line 2252 of file special/meanfield_e_tensor.f90
Fortran runtime warning: An array temporary was created for argument 'count' of procedure 'h5sselect_hyperslab_f'
At line 2260 of file special/meanfield_e_tensor.f90
Fortran runtime warning: An array temporary was created for argument 'start' of procedure 'h5sselect_hyperslab_f'
At line 2261 of file special/meanfield_e_tensor.f90
Fortran runtime warning: An array temporary was created for argument 'count' of procedure 'h5sselect_hyperslab_f'
At line 2275 of file special/meanfield_e_tensor.f90
Fortran runtime warning: An array temporary was created for argument 'dims' of procedure 'h5dread_double_6'
Alpha(1,1) min/max: -6.5287485718727112E-002 6.4101748168468475E-002
Alpha(2,2) min/max: -1.2434650212526321E-002 1.2690497562289238E-002
Alpha(3,3) min/max: -2.0216781646013260E-002 2.0747747272253036E-002
Alpha (rms): 2.8981762635842533E-002
At line 2167 of file special/meanfield_e_tensor.f90
Fortran runtime warning: An array temporary was created for argument 'start' of procedure 'h5sselect_hyperslab_f'
At line 2168 of file special/meanfield_e_tensor.f90
Fortran runtime warning: An array temporary was created for argument 'count' of procedure 'h5sselect_hyperslab_f'
At line 2176 of file special/meanfield_e_tensor.f90
Fortran runtime warning: An array temporary was created for argument 'start' of procedure 'h5sselect_hyperslab_f'
At line 2177 of file special/meanfield_e_tensor.f90
Fortran runtime warning: An array temporary was created for argument 'count' of procedure 'h5sselect_hyperslab_f'
At line 2188 of file special/meanfield_e_tensor.f90
Fortran runtime warning: An array temporary was created for argument 'dims' of procedure 'h5dread_double_5'
At line 2335 of file special/meanfield_e_tensor.f90
Fortran runtime warning: An array temporary was created for argument 'start' of procedure 'h5sselect_hyperslab_f'
At line 2336 of file special/meanfield_e_tensor.f90
Fortran runtime warning: An array temporary was created for argument 'count' of procedure 'h5sselect_hyperslab_f'
At line 2343 of file special/meanfield_e_tensor.f90
Fortran runtime warning: An array temporary was created for argument 'start' of procedure 'h5sselect_hyperslab_f'
At line 2344 of file special/meanfield_e_tensor.f90
Fortran runtime warning: An array temporary was created for argument 'count' of procedure 'h5sselect_hyperslab_f'
At line 2354 of file special/meanfield_e_tensor.f90
Fortran runtime warning: An array temporary was created for argument 'dims' of procedure 'h5dread_double_7'
At line 2167 of file special/meanfield_e_tensor.f90
Fortran runtime warning: An array temporary was created for argument 'start' of procedure 'h5sselect_hyperslab_f'
At line 2168 of file special/meanfield_e_tensor.f90
Fortran runtime warning: An array temporary was created for argument 'count' of procedure 'h5sselect_hyperslab_f'
At line 2176 of file special/meanfield_e_tensor.f90
Fortran runtime warning: An array temporary was created for argument 'start' of procedure 'h5sselect_hyperslab_f'
At line 2177 of file special/meanfield_e_tensor.f90
Fortran runtime warning: An array temporary was created for argument 'count' of procedure 'h5sselect_hyperslab_f'
At line 2188 of file special/meanfield_e_tensor.f90
Fortran runtime warning: An array temporary was created for argument 'dims' of procedure 'h5dread_double_5'
At line 2335 of file special/meanfield_e_tensor.f90
Fortran runtime warning: An array temporary was created for argument 'start' of procedure 'h5sselect_hyperslab_f'
At line 2336 of file special/meanfield_e_tensor.f90
Fortran runtime warning: An array temporary was created for argument 'count' of procedure 'h5sselect_hyperslab_f'
At line 2343 of file special/meanfield_e_tensor.f90
Fortran runtime warning: An array temporary was created for argument 'start' of procedure 'h5sselect_hyperslab_f'
At line 2344 of file special/meanfield_e_tensor.f90
Fortran runtime warning: An array temporary was created for argument 'count' of procedure 'h5sselect_hyperslab_f'
At line 2354 of file special/meanfield_e_tensor.f90
Fortran runtime warning: An array temporary was created for argument 'dims' of procedure 'h5dread_double_7'
Beta(1,1) min/max: -1.0975253826472908E-004 6.9529359461739659E-004
At line 2167 of file special/meanfield_e_tensor.f90
Fortran runtime warning: An array temporary was created for argument 'start' of procedure 'h5sselect_hyperslab_f'
At line 2168 of file special/meanfield_e_tensor.f90
Fortran runtime warning: An array temporary was created for argument 'count' of procedure 'h5sselect_hyperslab_f'
At line 2176 of file special/meanfield_e_tensor.f90
Fortran runtime warning: An array temporary was created for argument 'start' of procedure 'h5sselect_hyperslab_f'
At line 2177 of file special/meanfield_e_tensor.f90
Fortran runtime warning: An array temporary was created for argument 'count' of procedure 'h5sselect_hyperslab_f'
At line 2188 of file special/meanfield_e_tensor.f90
Fortran runtime warning: An array temporary was created for argument 'dims' of procedure 'h5dread_double_5'
At line 2335 of file special/meanfield_e_tensor.f90
Fortran runtime warning: An array temporary was created for argument 'start' of procedure 'h5sselect_hyperslab_f'
At line 2336 of file special/meanfield_e_tensor.f90
Fortran runtime warning: An array temporary was created for argument 'count' of procedure 'h5sselect_hyperslab_f'
At line 2343 of file special/meanfield_e_tensor.f90
Fortran runtime warning: An array temporary was created for argument 'start' of procedure 'h5sselect_hyperslab_f'
At line 2344 of file special/meanfield_e_tensor.f90
Fortran runtime warning: An array temporary was created for argument 'count' of procedure 'h5sselect_hyperslab_f'
At line 2354 of file special/meanfield_e_tensor.f90
Fortran runtime warning: An array temporary was created for argument 'dims' of procedure 'h5dread_double_7'
At line 2167 of file special/meanfield_e_tensor.f90
Fortran runtime warning: An array temporary was created for argument 'start' of procedure 'h5sselect_hyperslab_f'
At line 2168 of file special/meanfield_e_tensor.f90
Fortran runtime warning: An array temporary was created for argument 'count' of procedure 'h5sselect_hyperslab_f'
At line 2176 of file special/meanfield_e_tensor.f90
Fortran runtime warning: An array temporary was created for argument 'start' of procedure 'h5sselect_hyperslab_f'
At line 2177 of file special/meanfield_e_tensor.f90
Fortran runtime warning: An array temporary was created for argument 'count' of procedure 'h5sselect_hyperslab_f'
At line 2188 of file special/meanfield_e_tensor.f90
Fortran runtime warning: An array temporary was created for argument 'dims' of procedure 'h5dread_double_5'
Beta(2,2) min/max: -3.5094253689749166E-005 6.7426910391077399E-004
Beta(3,3) min/max: -6.3580488151458346E-020 8.8795420015230775E-004
Beta (rms): 1.2403251005069179E-003
Gamma(1) min/max: -1.0334515012800694E-002 8.9865848422050476E-003
Gamma(2) min/max: -7.6528657227754593E-003 7.3652607388794422E-003
Gamma(3) min/max: -9.4897933304309845E-003 9.1323787346482277E-003
Gamma (rms): 8.6551558238210924E-003
Delta(1) min/max: -1.5430695202667266E-004 1.6823856276459992E-004
Delta(2) min/max: -2.5125656975433230E-004 3.0344448168762028E-004
Delta(3) min/max: -1.3413980195764452E-004 1.2279328075237572E-004
Delta (rms): 1.2881215072652302E-004
At line 2335 of file special/meanfield_e_tensor.f90
Fortran runtime warning: An array temporary was created for argument 'start' of procedure 'h5sselect_hyperslab_f'
At line 2336 of file special/meanfield_e_tensor.f90
Fortran runtime warning: An array temporary was created for argument 'count' of procedure 'h5sselect_hyperslab_f'
At line 2343 of file special/meanfield_e_tensor.f90
Fortran runtime warning: An array temporary was created for argument 'start' of procedure 'h5sselect_hyperslab_f'
At line 2344 of file special/meanfield_e_tensor.f90
Fortran runtime warning: An array temporary was created for argument 'count' of procedure 'h5sselect_hyperslab_f'
At line 2354 of file special/meanfield_e_tensor.f90
Fortran runtime warning: An array temporary was created for argument 'dims' of procedure 'h5dread_double_7'
Kappa min/max: -8.9077115990221500E-004 8.7905389955267310E-004
Umean(1) min/max: -1.3105119578540325E-002 2.4402104318141937E-003
Umean(2) min/max: -1.2733181007206440E-002 1.2754739262163639E-002
Umean(3) min/max: -3.6003779619932175E-002 0.21262395381927490
Umean (rms): 1.3412426041711997E-002
Acoef(1,1) min/max: -6.5892703831195831E-002 6.4678139984607697E-002
Acoef(2,2) min/max: -1.2348907999694347E-002 1.2602049857378006E-002
Acoef(3,3) min/max: -2.0216781646013260E-002 2.0747747272253036E-002
Acoef (rms): 3.4432025061348188E-002
Bcoef min/max: -1.3905871892347932E-003 1.7024549888446927E-003
Construct alternative decomposition from raw tensors.
pencil_consistency_check: checking requested pencils
pencil_consistency_check: performing small pencil check
pencil_consistency_check: the small pencil check reported no problems
pencil_consistency_check: performing full pencil check (takes a while)
pencil_consistency_check: possible overcalculation... pencil graddiva ( 167) is requested, but does not appear to be required!
pencil_consistency_check: checking dependence on pencil initialization
pencil_consistency_check: results are independent of pencil initialization
pencil_consistency_check: checking diagnostics pencils
pencil_consistency_check: performing small pencil check
pencil_consistency_check: the small pencil check reported no problems
pencil_consistency_check: performing full pencil check (takes a while)
pencil_consistency_check: set lpencil_check_diagnos_opti=T in run.in to report
pencil_consistency_check: optimisation possibilities for diagnostics pencils
pencil_consistency_check: checking dependence on pencil initialization
pencil_consistency_check: diagnostics are independent of pencil initialization
pencil_consistency_check: all tests passed
pde: ENTER
SVN: ------- v. ( ) $Id$
duu_dt: diagnostics ...
daa_dt: SOLVE
Bcs for Ax, x: < s:a>, y: < a>, z: < p>
Bcs for Ay, x: < spr:nfr>, y: < s>, z: < p>
Bcs for Az, x: < spr:nfr>, y: < a>, z: < p>
daa_dt: iresistivity=eta-const
daa_dt: max(diffus_eta) = 0.90409064421822150
daa_dt: max(diffus_eta2) = 0.0000000000000000
daa_dt: max(diffus_eta3) = 0.0000000000000000
dspecial_dt: SOLVE dspecial_dt
---it--------t---------dt-------brms------bx2m------by2m------bz2m-----jxmax-----jymax-----jzmax-----emfrms---emfcoefrms-emfdiffmax-emfxdiffmax-emfydiffmax-emfzdiffmax-dtemf_ave-dtemf_dif---dteta---alphaxmax-alphaymax-alphazmax--emfxmax---emfymax---emfzmax--
0 0.000 8.456E-03 2.038E-06 9.487E-14 1.958E-12 2.100E-12 1.565E-04 2.282E-03 2.256E-03 2.187E-07 2.187E-07 0.000E+00 0.000E+00 0.000E+00 0.000E+00 1.867E-01 9.878E-01 2.548E-02 6.818E-08 7.838E-08 9.122E-08 8.208E-07 1.442E-06 1.279E-06
2 0.017 8.456E-03 1.687E-06 6.785E-14 1.248E-12 1.530E-12 1.487E-04 1.831E-03 1.610E-03 1.342E-07 1.342E-07 0.000E+00 0.000E+00 0.000E+00 0.000E+00 1.867E-01 9.878E-01 2.548E-02 4.849E-08 6.262E-08 6.767E-08 6.467E-07 3.061E-07 5.169E-07
4 0.034 8.456E-03 1.449E-06 5.360E-14 8.758E-13 1.170E-12 1.413E-04 1.654E-03 1.346E-03 9.384E-08 9.384E-08 0.000E+00 0.000E+00 0.000E+00 0.000E+00 1.867E-01 9.878E-01 2.548E-02 4.113E-08 5.024E-08 5.999E-08 5.210E-07 1.899E-07 2.401E-07
6 0.051 8.456E-03 1.275E-06 4.466E-14 6.539E-13 9.261E-13 1.343E-04 1.545E-03 1.275E-03 7.115E-08 7.115E-08 0.000E+00 0.000E+00 0.000E+00 0.000E+00 1.867E-01 9.878E-01 2.548E-02 3.509E-08 4.049E-08 5.449E-08 4.385E-07 1.440E-07 1.613E-07
8 0.068 8.456E-03 1.140E-06 3.843E-14 5.094E-13 7.526E-13 1.277E-04 1.443E-03 1.210E-03 5.689E-08 5.689E-08 0.000E+00 0.000E+00 0.000E+00 0.000E+00 1.867E-01 9.878E-01 2.548E-02 3.384E-08 3.279E-08 4.872E-08 4.041E-07 1.219E-07 1.154E-07
10 0.085 8.456E-03 1.033E-06 3.381E-14 4.094E-13 6.247E-13 1.214E-04 1.349E-03 1.150E-03 4.718E-08 4.718E-08 0.000E+00 0.000E+00 0.000E+00 0.000E+00 1.867E-01 9.878E-01 2.548E-02 3.351E-08 2.670E-08 4.321E-08 3.707E-07 1.107E-07 9.768E-08
12 0.101 8.456E-03 9.459E-07 3.022E-14 3.369E-13 5.276E-13 1.178E-04 1.261E-03 1.093E-03 4.017E-08 4.017E-08 0.000E+00 0.000E+00 0.000E+00 0.000E+00 1.867E-01 9.878E-01 2.548E-02 3.309E-08 2.319E-08 3.816E-08 3.385E-07 9.946E-08 8.330E-08
14 0.118 8.456E-03 8.729E-07 2.733E-14 2.826E-13 4.521E-13 1.182E-04 1.180E-03 1.041E-03 3.488E-08 3.488E-08 0.000E+00 0.000E+00 0.000E+00 0.000E+00 1.867E-01 9.878E-01 2.548E-02 3.256E-08 2.052E-08 3.603E-08 3.077E-07 8.904E-08 7.156E-08
16 0.135 8.456E-03 8.111E-07 2.496E-14 2.407E-13 3.922E-13 1.182E-04 1.104E-03 9.923E-04 3.077E-08 3.077E-08 0.000E+00 0.000E+00 0.000E+00 0.000E+00 1.867E-01 9.878E-01 2.548E-02 3.191E-08 1.810E-08 3.411E-08 2.787E-07 8.160E-08 6.189E-08
18 0.152 8.456E-03 7.580E-07 2.296E-14 2.078E-13 3.438E-13 1.212E-04 1.033E-03 9.469E-04 2.749E-08 2.749E-08 0.000E+00 0.000E+00 0.000E+00 0.000E+00 1.867E-01 9.878E-01 2.548E-02 3.116E-08 1.703E-08 3.223E-08 2.515E-07 8.003E-08 5.389E-08
Simulation finished after 19 time-steps
Writing final snapshot at time t = 0.16065760407096422
Wall clock time [hours] = 1.047E-04 (+/- 2.7778E-10)
Wall clock time/timestep/meshpoint [microsec] = 7.746094
Wall clock time/timestep/local meshpoint [microsec] = 30.98438
Rhs wall clock time/timestep/local meshpoint [microsec] = 267.1050
Maximum used memory per cpu [MBytes] = 13.691
Maximum used memory [MBytes] = 52.656
real 7.22
user 7.90
sys 2.04